PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100249220141
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family G2-like
Protein Properties Length: 271aa    MW: 30488.7 Da    PI: 8.9951
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100249220141genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like78.96.3e-251161151
                       G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51
                                  k+rl+Wt+eLH+ F +av+q+GG+++AtPk il++m ++gLt+ hvkSHLQ
  Ote100249220141|100249220141 11 KERLKWTKELHDLFEKAVNQIGGPDRATPKGILKAMAIPGLTIFHVKSHLQ 61
                                  68************************************************* PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.58E-14862IPR009057Homeodomain-like
PROSITE profilePS512949.623868IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.6E-23961IPR009057Homeodomain-like
TIGRFAMsTIGR015574.6E-201163IPR006447Myb domain, plants
PfamPF002492.8E-61361IPR001005SANT/Myb domain
PfamPF143794.7E-18107151IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MGSNRANCSS KERLKWTKEL HDLFEKAVNQ IGGPDRATPK GILKAMAIPG LTIFHVKSHL  60
QVSLSRKTEN TGCPCSHEKK TIQKASSKDE VYQRCFPTSL LSRKGAQLNE ALLIQMEAQR  120
RLSDQLEVQK SLKMKIEAQG RFLDKIMEEY KNRSPGTKQI KPYSPVLSLP SLSEESDQSN  180
GKEFESDSSE VGEISSKEEF RAQKRIKIQE QNVMPQINRA PSFNLDSQSL NLFCLDGISK  240
NLYSDQEMGC PWGGNAFSSP LLLGMYNQLN Q
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077547.11e-121PREDICTED: protein PHR1-LIKE 1-like
RefseqXP_011077548.11e-121PREDICTED: protein PHR1-LIKE 1-like
RefseqXP_011077549.11e-121PREDICTED: protein PHR1-LIKE 1-like
RefseqXP_011077550.11e-121PREDICTED: protein PHR1-LIKE 1-like
TrEMBLA0A022QJI31e-110A0A022QJI3_ERYGU; Uncharacterized protein
STRINGPOPTR_0006s10190.11e-65(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA101012026